AGT23004 (N559_1240)

Aliases : N559_1240

Description : hypothetical protein [Ensembl]. HTH ArsR-type DNA-binding domain, arsR family [InterProScan].

Gene families : OG_02_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT23004
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAC75714 ygaV, b2667 tributyltin-inducible repressor of ygaVP [Ensembl].... 0.05 OrthoFinder
AEA92792 OG1RF_10105 ArsR family transcriptional regulator [Ensembl].... 0.04 OrthoFinder
CCG27571 No alias Cadmium efflux system accessory protein [Ensembl].... 0.04 OrthoFinder
CCL18689 BN171_250002 Transcriptional regulator, ArsR family [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR001845 HTH_ArsR_DNA-bd_dom 23 70
No external refs found!