Aliases : N559_1250
Description : outer membrane protein; export and assembly of type 1 fimbriae [Ensembl]. PapC C-terminal domain, PapC N-terminal domain [InterProScan].
Gene families : OG_02_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AGT23014 | |
Cluster | HCCA: Cluster_21 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC77273 | fimD, b4317 | fimbrial usher outer membrane porin protein; FimCD... | 0.04 | OrthoFinder | |
AGT22732 | N559_0945, FimD | outer membrane usher protein FimD [Ensembl]. PapC... | 0.04 | OrthoFinder | |
AGT23011 | N559_1247 | fimbrial usher protein [Ensembl]. PapC N-terminal... | 0.07 | OrthoFinder | |
AGT24313 | N559_2637 | fimbrial usher protein [Ensembl]. PapC N-terminal... | 0.04 | OrthoFinder | |
AGT26409 | N559_4823 | putative outer membrane usher protein [Ensembl]. PapC... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0009297 | pilus assembly | IEA | Interproscan |
MF | GO:0015473 | fimbrial usher porin activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006066 | alcohol metabolic process | IEP | Enrichment |
BP | GO:0006071 | glycerol metabolic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0007155 | cell adhesion | IEP | Enrichment |
CC | GO:0009279 | cell outer membrane | IEP | Enrichment |
CC | GO:0009289 | pilus | IEP | Enrichment |
BP | GO:0019400 | alditol metabolic process | IEP | Enrichment |
BP | GO:0019751 | polyol metabolic process | IEP | Enrichment |
BP | GO:0022610 | biological adhesion | IEP | Enrichment |
CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
BP | GO:0034219 | carbohydrate transmembrane transport | IEP | Enrichment |
CC | GO:0042995 | cell projection | IEP | Enrichment |
BP | GO:0045229 | external encapsulating structure organization | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Enrichment |
BP | GO:0071555 | cell wall organization | IEP | Enrichment |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Enrichment |
No external refs found! |