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  5. AGT23030

AGT23030 (N559_1266)


Aliases : N559_1266

Description : RND family multidrug efflux permease protein OqxB3 [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23030
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AHY40240 CJ8421_05130 RND pump protein [Ensembl]. AcrB/AcrD/AcrF family [Interproscan]. 0.02 OrthoFinder
CBI66363 acrB, HPB8_806 Acriflavine resistance protein (AcrB) [Ensembl].... 0.03 OrthoFinder
CCL18817 BN171_2660006 Putative multidrug efflux pump [Ensembl]. AcrB/AcrD/AcrF... 0.03 OrthoFinder
CRO58919 bepE_2 Efflux pump membrane transporter BepE [Ensembl].... 0.04 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.01 OrthoFinder
EDJ91679 CGSHi22421_07988 predicted cation/multidrug efflux pump [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008882 [glutamate-ammonia-ligase] adenylyltransferase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 3 1034
No external refs found!