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Aliases : N559_1356, SigE
Description : anti-RNA polymerase sigma factor SigE [Ensembl]. N-terminal domain, C-terminal domain [InterProScan].
Gene families : OG_02_0001941 (OrthoFinder) Phylogenetic Tree(s): OG0001941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AGT23118 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75625 | rseA, b2572 | anti-sigma factor [Ensembl]. Anti sigma-E protein RseA... | 0.06 | OrthoFinder | |
| AAL21533 | STM2639, rseA | anti sigma E (sigma 24) factor, negative regulator... | 0.1 | OrthoFinder | |
| EDJ89962 | CGSHi22421_05777 | hypothetical protein [Ensembl]. Anti sigma-E protein... | 0.03 | OrthoFinder | |
| EDJ89963 | CGSHi22421_05782 | RNA polymerase sigma factor RpoE [Ensembl]. Anti sigma-E... | 0.03 | OrthoFinder | |
| KNA51128 | VCV51_033629, RseA | sigma-E factor negative regulatory protein RseA... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016989 | sigma factor antagonist activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003908 | methylated-DNA-[protein]-cysteine S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008939 | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032784 | regulation of DNA-templated transcription, elongation | IEP | Enrichment |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0055070 | copper ion homeostasis | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| No external refs found! |