AGT23144 (N559_1382)


Aliases : N559_1382

Description : putative general substrate transporter [Ensembl].


Gene families : OG_02_0001117 (OrthoFinder) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23144
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC75880 araE, b2841 arabinose transporter [Ensembl]. Sugar (and other)... 0.07 OrthoFinder
AAC75980 galP, b2943 D-galactose transporter [Ensembl]. Sugar (and other)... 0.03 OrthoFinder
AAC77001 xylE, b4031 D-xylose transporter [Ensembl]. Sugar (and other)... 0.03 OrthoFinder
AAL21892 STM3016, araE L-arabinose: proton symport protein [Ensembl]. Sugar... 0.06 OrthoFinder
AAL21966 STM3091, galP MFS family galactose:proton symporter [Ensembl]. Sugar... 0.07 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 37 481
No external refs found!