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AGT23364 (N559_1618)


Aliases : N559_1618

Description : OmpK36 [Ensembl].


Gene families : OG_02_0000308 (OrthoFinder) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23364

Target Alias Description ECC score Gene Family Method Actions
AAL19933 STM0999, ompF outer membrane protein 1a (ia;b;f), porin [Ensembl].... 0.1 OrthoFinder
EDJ90293 nagA, CGSHi22421_09537 N-acetylglucosamine-6-phosphate deacetylase [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009279 cell outer membrane IEA Interproscan
MF GO:0015288 porin activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0034220 ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001702 Porin_Gram-ve 27 367
No external refs found!