AGT23388 (N559_1642)


Aliases : N559_1642

Description : ABC transporter, permease protein [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23388
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC75239 yejB, b2178 microcin C ABC transporter permease [Ensembl].... 0.05 OrthoFinder
CRN63931 yejB_1 Inner membrane ABC transporter permease protein YejB... 0.03 OrthoFinder
CRO37911 yejB_2 Inner membrane ABC transporter permease protein YejB... 0.07 OrthoFinder
KNA58586 VCV51_031121 binding-protein-dependent transport system inner... 0.02 OrthoFinder
KNA60922 VCV51_031896 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
MF GO:0015128 gluconate transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035429 gluconate transmembrane transport IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
BP GO:0042873 aldonate transmembrane transport IEP Enrichment
MF GO:0042879 aldonate transmembrane transporter activity IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 152 359
No external refs found!