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  5. AGT23390

AGT23390 (N559_1644)


Aliases : N559_1644

Description : hypothetical protein [Ensembl]. EAL domain, CSS motif-containing domain [InterProScan].


Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23390
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC73920 pdeI, b0833 putative membrane-anchored cyclic-di-GMP... 0.01 OrthoFinder
AAC74367 pdeR, b1285 cyclic-di-GMP phosphodiesterase; csgD regulator;... 0.03 OrthoFinder
AAL20621 STM1703, yciR putative PAS/PAC domain protein [Ensembl]. EAL domain,... 0.04 OrthoFinder
AAL21118 STM2215, rtn putative membrane protein involved in resistance to... 0.03 OrthoFinder
CCL17715 BN171_1700002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL19368 BN171_3080015 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001633 EAL_dom 271 500
IPR024744 CSS-motif_dom 40 236
No external refs found!