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AGT23404 (N559_1660)


Aliases : N559_1660

Description : lysine transporter [Ensembl]. Amino acid permease/ SLC12A domain [InterProScan].


Gene families : OG_02_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23404
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AAC73223 aroP, b0112 aromatic amino acid transporter [Ensembl]. Amino acid... 0.06 OrthoFinder
AAC73363 mmuP, b0260 CP4-6 prophage; putative S-methylmethionine transporter... 0.05 OrthoFinder
AAC75217 lysP, b2156 lysine transporter [Ensembl]. Amino acid permease [Interproscan]. 0.06 OrthoFinder
AAC77165 cycA, b4208 D-alanine/D-serine/glycine transporter [Ensembl]. Amino... 0.04 OrthoFinder
AAL19114 STM0150, aroP APC family aromatic amino acid transporter [Ensembl].... 0.07 OrthoFinder
AAL21104 STM2200, lysP APC family lysine-specific permease [Ensembl]. Amino... 0.05 OrthoFinder
AAL23218 STM4398, cycA APC family D-alanine/D-serine/glycine transport protein... 0.05 OrthoFinder
AGT24504 N559_2833 D-alanine/D-serine/glycine transport protein [Ensembl].... 0.06 OrthoFinder
AGT25927 N559_4312 aromatic amino acid transporter [Ensembl]. Amino acid... 0.04 OrthoFinder
CBI66690 rocE, HPB8_1133 amino acid permease (RocE) [Ensembl]. Amino acid... 0.02 OrthoFinder
CRP47581 proY_2 Proline-specific permease ProY [Ensembl]. Amino acid... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004841 AA-permease/SLC12A_dom 21 475
No external refs found!