AGT23436 (N559_1694)


Aliases : N559_1694

Description : sensor histidine kinase [Ensembl]. GAF domain [InterProScan].


Gene families : OG_02_0000299 (OrthoFinder) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23436
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC75187 btsS, b2126 inner membrane putative sensory kinase in two-component... 0.01 OrthoFinder
AAL21063 STM2159, yehU putative sensor/kinase in regulatory system [Ensembl].... 0.02 OrthoFinder
CCG27655 YesM Two-component sensor kinase YesM [Ensembl]. Histidine... 0.04 OrthoFinder
CCL19064 BN171_2850003 Two-component sensor histidine kinase [Ensembl]. 5TMR of... 0.03 OrthoFinder
CPC93589 lytS, ERS093114_01672 Autolysis histidine kinase LytS [Ensembl]. 5TMR of... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0004673 protein histidine kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0071555 cell wall organization IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010565 regulation of cellular ketone metabolic process IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
BP GO:0019216 regulation of lipid metabolic process IEP Enrichment
BP GO:0019217 regulation of fatty acid metabolic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0062012 regulation of small molecule metabolic process IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR010559 Sig_transdc_His_kin_internal 371 446
IPR003018 GAF 243 352
IPR011620 Sig_transdc_His_kinase_LytS_TM 28 196
No external refs found!