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  5. AGT23463

AGT23463 (N559_1721)


Aliases : N559_1721

Description : putative ABC transport system periplasmic binding protein [Ensembl]. Solute-binding protein family 5 domain, family 5 Middle [InterProScan].


Gene families : OG_02_0000055 (OrthoFinder) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23463
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC74376 sapA, b1294 antimicrobial peptide transport ABC transporter... 0.1 OrthoFinder
AAC76501 nikA, b3476 nickel/heme ABC transporter periplasmic binding protein... 0.04 OrthoFinder
AAC76569 dppA, b3544 dipeptide/heme ABC transporter periplasmic binding... 0.11 OrthoFinder
AAK99997 spr1194, appA ABC transporter substrate-binding protein-oligopeptide... 0.03 OrthoFinder
AAL20181 STM1255 putative ABC transporter periplasmic binding protein... 0.02 OrthoFinder
AAL20609 STM1692, sapA ABC superfamily peptide transport protein [Ensembl].... 0.03 OrthoFinder
AAL22491 STM3630, dppA dipeptide transport protein [Ensembl]. Bacterial... 0.03 OrthoFinder
AEA95053 opp2A, OG1RF_12366 peptide ABC superfamily ATP binding cassette... 0.08 OrthoFinder
AGT22123 N559_0304 nickel ABC transporter, periplasmic nickel-binding... 0.03 OrthoFinder
AGT25119 N559_3468 peptide ABC transporter periplasmic substrate-binding... 0.07 OrthoFinder
AGT25383 N559_3745 putative ABC transport system periplasmic dipeptide... 0.03 OrthoFinder
AGT26721 N559_5147 ABC transporter, substrate-binding protein, family 5... 0.03 OrthoFinder
AKI48107 L2625_00134 oligopeptide ABC transporter, oligopeptide-binding... 0.05 OrthoFinder
CCL17024 oppA, BN171_1090005 ABC-type transport system, oligopeptide-family... 0.08 OrthoFinder
CCL19134 appA, BN171_2880001 ABC-type transport system, oligopeptide-family... 0.03 OrthoFinder
CPC43753 oppA_1, ERS093114_00438 Oligopeptide ABC transporter%2C periplasmic... 0.03 OrthoFinder
CPC72064 nikA, ERS093114_01157 peptide ABC transporter peptide-binding protein... 0.07 OrthoFinder
CPD17760 opp-1A, ERS093114_02216 Oligopeptide transporter putative substrate binding... 0.05 OrthoFinder
CRO32936 hbpA Hemin-binding lipoprotein [Ensembl]. Bacterial... 0.03 OrthoFinder
CRP12075 dppA_4 Dipeptide-binding protein [Ensembl]. Bacterial... 0.1 OrthoFinder
CRP12127 dppA_5 Dipeptide-binding protein [Ensembl]. Bacterial... 0.08 OrthoFinder
EDJ90884 CGSHi22421_03508 ABC-type transport system, periplasmic component,... 0.03 OrthoFinder
KNA51873 VCV51_030403 bacterial extracellular solute-binding protein, family 5... 0.07 OrthoFinder
KNA52458 VCV51_030122 bacterial extracellular solute-binding protein, family 5... 0.03 OrthoFinder
KNA58587 VCV51_031120 bacterial extracellular solute-binding protein, family 5... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 60 428
No external refs found!