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  5. AGT23464

AGT23464 (N559_1722, DppB)


Aliases : N559_1722, DppB

Description : putative dipeptide ABC transporter, permease protein DppB [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23464
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73918 gsiC, b0831 glutathione ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.04 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.08 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.04 OrthoFinder
AAL19786 STM0850, yliC putative ABC transporter periplasmic binding protein... 0.03 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.04 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT22074 N559_0252, DppB dipeptide transporter permease DppB [Ensembl].... 0.05 OrthoFinder
AGT22122 N559_0303, NikB nickel transporter permease NikB [Ensembl].... 0.04 OrthoFinder
AGT23803 N559_2085 oligopeptide transporter permease [Ensembl].... 0.05 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.1 OrthoFinder
AGT25384 N559_3746 putative ABC transport system permease component... 0.06 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
AKI50193 oppB, L2625_02359 oligopeptide ABC transporter, permease protein... 0.04 OrthoFinder
CBI65786 oppB, HPB8_229 peptide/nickel transport system permease protein... 0.02 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.03 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.02 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.03 OrthoFinder
CPC72096 opp-3B, ERS093114_01158 oligopeptide permease%2C channel-forming protein... 0.03 OrthoFinder
CPC95781 gsiC, ERS093114_01725 Oligopeptide transport system permease protein... 0.03 OrthoFinder
CPD17797 opp-1B, ERS093114_02217 Oligopeptide transporter putative membrane permease... 0.03 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.06 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 84 305
No external refs found!