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  5. AGT23465

AGT23465 (N559_1723)


Aliases : N559_1723

Description : ABC transporter permease [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23465
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.05 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAL00508 spr1705, amiD ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.05 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.04 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.05 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.07 OrthoFinder
AGT23804 N559_2086 oligopeptide transport permease protein [Ensembl].... 0.04 OrthoFinder
AGT23970 N559_2267 oligopeptide ABC transport system permease component... 0.05 OrthoFinder
AGT25117 N559_3466 putative ABC transport system permease component... 0.04 OrthoFinder
AGT25385 N559_3747 putative ABC transport system permease protein... 0.04 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.05 OrthoFinder
AKI50192 oppC, L2625_02358 oligopeptide ABC transporter, permease protein... 0.04 OrthoFinder
CBI66819 dppC, HPB8_1262 dipeptide ABC transporter, permease protein (DppC)... 0.03 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.04 OrthoFinder
CPC32230 gsiD_1, ERS093114_00036 nickel transport system permease protein [Ensembl].... 0.02 OrthoFinder
CPC43895 oppC_2, ERS093114_00442 Oligopeptide transport system permease protein oppC... 0.04 OrthoFinder
CPC72124 opp-3C, ERS093114_01159 oligopeptide permease%2C channel-forming protein... 0.03 OrthoFinder
CPD17831 opp-1C, ERS093114_02218 Oligopeptide transporter putative membrane permease... 0.03 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.05 OrthoFinder
EDJ91925 oppD, CGSHi22421_09218 oligopeptide transporter ATP-binding component... 0.03 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.04 OrthoFinder
KNA52460 VCV51_030124 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR025966 OppC_N 36 71
IPR000515 MetI-like 118 299
No external refs found!