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  5. AGT23545

AGT23545 (N559_1811)


Aliases : N559_1811

Description : hypothetical protein [Ensembl]. GGDEF domain, GAF domain [InterProScan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23545
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC74423 dgcM, b1341 diguanylate cyclase, csgD regulator [Ensembl]. PAS fold,... 0.11 OrthoFinder
AAC74563 dosC, b1490 diguanylate cyclase, cold-and stationary phase-induced... 0.14 OrthoFinder
AAL19339 STM0385, yaiC putative diguanylate cyclase/phosphodiesterase domain 1... 0.06 OrthoFinder
CCL19831 BN171_3520017 Putative diguanylate kinase signaling protein [Ensembl].... 0.02 OrthoFinder
CCL20093 BN171_3690037 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder
KNA54882 VCV51_031808 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA55698 VCV51_031009 CHASE domain-containing protein [Ensembl]. CHASE domain,... 0.03 OrthoFinder
KNA59936 VCV51_032347 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 164 318
IPR003018 GAF 28 155
No external refs found!