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  5. AGT23560

AGT23560 (N559_1826)


Aliases : N559_1826

Description : LysR family transcriptional regulator [Ensembl]. LysR substrate binding domain [InterProScan].


Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23560
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
CRO43057 dmlR_15 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
CRO69698 dmlR_18 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
CRP16170 dmlR_23 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
CRP22917 dmlR_25 D-malate degradation protein R [Ensembl]. LysR substrate... 0.03 OrthoFinder
CRP68785 dmlR_33 D-malate degradation protein R [Ensembl]. LysR substrate... 0.03 OrthoFinder
KNA59372 VCV51_031318 LysR substrate binding domain-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008772 [isocitrate dehydrogenase (NADP+)] kinase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 15 220
No external refs found!