AGT23566 (N559_1832)

Aliases : N559_1832

Description : DNA mismatch endonuclease Vsr [Ensembl].

Gene families : OG_02_0002856 (OrthoFinder) Phylogenetic Tree(s): OG0002856_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT23566
Cluster	HCCA: Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006298	mismatch repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Enrichment
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
MF	GO:0004016	adenylate cyclase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Enrichment
MF	GO:0004602	glutathione peroxidase activity	IEP	Enrichment
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Enrichment
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
CC	GO:0005887	integral component of plasma membrane	IEP	Enrichment
BP	GO:0005984	disaccharide metabolic process	IEP	Enrichment
BP	GO:0005991	trehalose metabolic process	IEP	Enrichment
BP	GO:0006171	cAMP biosynthetic process	IEP	Enrichment
BP	GO:0006826	iron ion transport	IEP	Enrichment
BP	GO:0007267	cell-cell signaling	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
MF	GO:0008417	fucosyltransferase activity	IEP	Enrichment
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Enrichment
MF	GO:0008914	leucyltransferase activity	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009246	enterobacterial common antigen biosynthetic process	IEP	Enrichment
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009311	oligosaccharide metabolic process	IEP	Enrichment
BP	GO:0009372	quorum sensing	IEP	Enrichment
BP	GO:0009595	detection of biotic stimulus	IEP	Enrichment
BP	GO:0009607	response to biotic stimulus	IEP	Enrichment
MF	GO:0009975	cyclase activity	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015927	trehalase activity	IEP	Enrichment
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Enrichment
MF	GO:0016755	aminoacyltransferase activity	IEP	Enrichment
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Enrichment
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0019213	deacetylase activity	IEP	Enrichment
BP	GO:0023052	signaling	IEP	Enrichment
BP	GO:0030163	protein catabolic process	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
MF	GO:0030554	adenyl nucleotide binding	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
CC	GO:0033573	high-affinity iron permease complex	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0034755	iron ion transmembrane transport	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
BP	GO:0036065	fucosylation	IEP	Enrichment
MF	GO:0036094	small molecule binding	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043168	anion binding	IEP	Enrichment
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	Enrichment
MF	GO:0043768	S-ribosylhomocysteine lyase activity	IEP	Enrichment
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Enrichment
BP	GO:0046058	cAMP metabolic process	IEP	Enrichment
BP	GO:0046378	enterobacterial common antigen metabolic process	IEP	Enrichment
BP	GO:0051606	detection of stimulus	IEP	Enrichment
BP	GO:0052652	cyclic purine nucleotide metabolic process	IEP	Enrichment
BP	GO:0060245	detection of cell density	IEP	Enrichment
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
CC	GO:1902495	transmembrane transporter complex	IEP	Enrichment
CC	GO:1904949	ATPase complex	IEP	Enrichment
CC	GO:1905862	ferroxidase complex	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment
CC	GO:1990351	transporter complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004603	DNA_mismatch_endonuc_vsr	5	77

External Links

No external refs found!

AGT23566 (N559_1832)

Expression Profile

Co-expression Networks

Functional Annotation