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AGT23597 (N559_1864)


Aliases : N559_1864

Description : L-arabinose transporter ATP-binding protein [Ensembl].


Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23597
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC74970 araG, b1900 L-arabinose ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC76591 xylG, b3567 D-xylose ABC transporter dual domain ATPase [Ensembl].... 0.02 OrthoFinder
AAC77048 alsA, b4087 D-allose ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAL21093 STM2189, mglA galactose (methyl-galactoside) transport protein... 0.05 OrthoFinder
AAL22740 STM3882, rbsA D-ribose high-affinity transport protein [Ensembl]. ABC... 0.03 OrthoFinder
AGT25370 N559_3732 putative ribose ABC transport system ATP-binding... 0.04 OrthoFinder
CRN86529 araG Arabinose import ATP-binding protein AraG [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 23 172
IPR003439 ABC_transporter-like_ATP-bd 274 427
No external refs found!