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  5. AGT23620

AGT23620 (N559_1887)


Aliases : N559_1887

Description : high-affinity zinc transporter periplasmic component [Ensembl].


Gene families : OG_02_0000138 (OrthoFinder) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23620
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC74927 znuA, b1857 zinc ABC transporter periplasmic binding protein... 0.2 OrthoFinder
AAL00298 spr1494, psaA ABC transporter substrate-binding protein-manganese... 0.03 OrthoFinder
AAL20188 STM1263 putative periplasmic protein [Ensembl]. ZinT (YodA)... 0.08 OrthoFinder
AAL21741 STM2861, sitA fur regulated Salmonella iron transporter [Ensembl].... 0.04 OrthoFinder
AEA92738 adcA, OG1RF_10051 metal ABC superfamily ATP binding cassette transporter,... 0.02 OrthoFinder
AEA94366 OG1RF_11679 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AEA95159 OG1RF_12472 ABC superfamily ATP binding cassette transporter,... 0.02 OrthoFinder
AGT22925 N559_1156 iron ABC superfamily ATP binding cassette transporter,... 0.02 OrthoFinder
AKI48122 L2625_00149 zinc ABC transporter, zinc-binding protein, lipoprotein... 0.13 OrthoFinder
AKI49842 mntA, L2625_01989 ABC transporter, manganese-binding protein [Ensembl].... 0.06 OrthoFinder
CRO76599 psaA Pneumococcal surface adhesin A [Ensembl]. Zinc-uptake... 0.08 OrthoFinder
CRP72811 znuA High-affinity zinc uptake system protein ZnuA precursor... 0.04 OrthoFinder
EDJ90089 CGSHi22421_06583 putative periplasmic chelated iron binding protein... 0.04 OrthoFinder
KNA59607 VCV51_031393 zinc ABC transporter [Ensembl]. Zinc-uptake complex... 0.06 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
MF GO:0008772 [isocitrate dehydrogenase (NADP+)] kinase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR006127 ZnuA-like 28 308
No external refs found!