AGT23750 (N559_2028)


Aliases : N559_2028

Description : type VI secretion protein, VC_A0111 family [Ensembl].


Gene families : OG_02_0001715 (OrthoFinder) Phylogenetic Tree(s): OG0001715_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23750
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
CRO45672 No alias type VI secretion protein, family [Ensembl]. Type VI... 0.05 OrthoFinder
CRO78693 No alias type VI secretion protein, family [Ensembl]. Type VI... 0.04 OrthoFinder
CRP27061 No alias type VI secretion protein, family [Ensembl]. Type VI... 0.03 OrthoFinder
KNA60679 VCV51_032118 type VI secretion protein [Ensembl]. Type VI secretion... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR010732 T6SS_TssG-like 25 323
No external refs found!