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  5. AGT23850

AGT23850 (N559_2134)


Aliases : N559_2134

Description : iron compound ABC superfamily ATP binding cassette transporter, binding protein [Ensembl]. FecCD transport family [InterProScan].


Gene families : OG_02_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23850
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AAC77244 fecD, b4288 ferric citrate ABC transporter permease [Ensembl]. FecCD... 0.04 OrthoFinder
AAC77245 fecC, b4289 ferric citrate ABC transporter permease [Ensembl]. FecCD... 0.07 OrthoFinder
AAK99739 spr0935, ABC-MSP ABC transporter membrane-spanning permease-iron... 0.03 OrthoFinder
AAK99740 spr0936, ABC-MSP ABC transporter membrane-spanning permease-iron... 0.03 OrthoFinder
AAL19158 STM0194, fhuB hydroxamate-dependent iron uptake [Ensembl]. FecCD... 0.04 OrthoFinder
AAL19542 STM0591, fepG ferric enterobactin transporter [Ensembl]. FecCD... 0.06 OrthoFinder
AAL19543 STM0592, fepD ferric enterobactin (enterochelin) transporter... 0.03 OrthoFinder
AAL19708 STM0770 putative ABC transport protein [Ensembl]. FecCD... 0.02 OrthoFinder
AGT26711 N559_5137, FecD iron(III) dicitrate transport system permease protein... 0.04 OrthoFinder
AGT26712 N559_5138, FecC fe(3+) dicitrate transport system permease protein FecC... 0.03 OrthoFinder
AHY40788 CJ8421_08080 Hemin ABC transporter, permease protein, putative... 0.03 OrthoFinder
AKI50358 L2625_02546 iron compound ABC transporter, permease protein... 0.03 OrthoFinder
CBI66220 fecD, HPB8_663 putative ABC transporter permease protein MJ0087... 0.02 OrthoFinder
CCG27722 No alias ABC-type Fe3+-siderophore transport system,permease 2... 0.04 OrthoFinder
CCL19371 fhuG, BN171_3080018 ABC-type transport system, ferrichrome-specific permease... 0.03 OrthoFinder
CCL19372 fhuB, BN171_3080019 ABC-type transport system, ferrichrome-specific permease... 0.03 OrthoFinder
CPC39009 isdF, ERS093114_00292 iron/heme permease [Ensembl]. FecCD transport family... 0.02 OrthoFinder
CPC52646 fhuG, ERS093114_00704 Ferrichrome transport system permease protein fhuG... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000522 ABC_transptr_permease_BtuC 25 341
No external refs found!