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  5. AGT23878

AGT23878 (N559_2164)


Aliases : N559_2164

Description : putative ABC transporter permease protein [Ensembl]. FecCD transport family [InterProScan].


Gene families : OG_02_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23878
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AAL19708 STM0770 putative ABC transport protein [Ensembl]. FecCD... 0.01 OrthoFinder
KNA59977 VCV51_032389 FecCD transporter [Ensembl]. FecCD transport family... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
MF GO:0008924 malate dehydrogenase (quinone) activity IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR000522 ABC_transptr_permease_BtuC 21 326
No external refs found!