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  5. AGT23895

AGT23895 (N559_2183)


Aliases : N559_2183

Description : ABC transporter, permease protein [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000206 (OrthoFinder) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT23895
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73470 tauC, b0367 taurine ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AGT24969 N559_3311 alkanesulfonate transporter permease subunit [Ensembl].... 0.07 OrthoFinder
AGT25725 N559_4099 taurine transporter subunit [Ensembl]. transmembrane... 0.06 OrthoFinder
CPC96936 ssuC, ERS093114_01751 ABC transporter permease protein [Ensembl].... 0.05 OrthoFinder
CRO44385 cmpB_1 Bicarbonate transport system permease protein CmpB... 0.03 OrthoFinder
CRP16445 ssuC_1 Putative aliphatic sulfonates transport permease protein... 0.08 OrthoFinder
CRP16761 cmpB_2 Bicarbonate transport system permease protein CmpB... 0.03 OrthoFinder
CRP18104 ssuC_2 Putative aliphatic sulfonates transport permease protein... 0.03 OrthoFinder
CRP37564 ssuC_3 Putative aliphatic sulfonates transport permease protein... 0.04 OrthoFinder
CRP38492 ssuC_5 Putative aliphatic sulfonates transport permease protein... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 152 312
No external refs found!