AGT24059 (N559_2360)


Aliases : N559_2360

Description : transcriptional regulator [Ensembl]. gntR family [InterProScan].


Gene families : OG_02_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24059
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
CRO34462 gabR_1 HTH-type transcriptional regulatory protein GabR... 0.03 OrthoFinder
CRO96044 yjiR_2 putative HTH-type transcriptional regulator YjiR... 0.02 OrthoFinder
CRP05205 gabR_3 HTH-type transcriptional regulatory protein GabR... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006274 DNA replication termination IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0043772 acyl-phosphate glycerol-3-phosphate acyltransferase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000524 Tscrpt_reg_HTH_GntR 3 66
IPR004839 Aminotransferase_I/II 146 447
No external refs found!