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AGT24063 (N559_2364)


Aliases : N559_2364

Description : putative transport system permease component [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000276 (OrthoFinder) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24063
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC73944 potI, b0857 putrescine ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC74525 ydcV, b1443 putative ABC transporter permease [Ensembl].... 0.11 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 80 247
No external refs found!