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  5. AGT24128

AGT24128 (N559_2435)


Aliases : N559_2435

Description : peptide ABC transporter membrane protein [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24128
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.05 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL20663 STM1745, oppB oligopeptide transport protein [Ensembl].... 0.03 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.05 OrthoFinder
AEA93323 opp1B, OG1RF_10636 oligopeptide ABC superfamily ATP binding cassette... 0.02 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.08 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.1 OrthoFinder
AGT25384 N559_3746 putative ABC transport system permease component... 0.07 OrthoFinder
AGT26720 N559_5146, GsiC putative glutathione ABC transporter, permease protein... 0.04 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
AKI50193 oppB, L2625_02359 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.05 OrthoFinder
CCG26341 OppB Oligopeptide transport system permease protein OppB (TC... 0.05 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.04 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.04 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.06 OrthoFinder
CPC72096 opp-3B, ERS093114_01158 oligopeptide permease%2C channel-forming protein... 0.03 OrthoFinder
CPC95781 gsiC, ERS093114_01725 Oligopeptide transport system permease protein... 0.03 OrthoFinder
CPD17797 opp-1B, ERS093114_02217 Oligopeptide transporter putative membrane permease... 0.03 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.06 OrthoFinder
EDJ90656 CGSHi22421_04083 dipeptide transport system permease protein [Ensembl].... 0.03 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.03 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.04 OrthoFinder
KNA60922 VCV51_031896 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 126 306
No external refs found!