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  5. AGT24254

AGT24254 (N559_2574)


Aliases : N559_2574

Description : putative ABC transporter, nucleotide binding/ATPase protein [Ensembl]. Periplasmic binding protein domain [InterProScan].


Gene families : OG_02_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24254
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC76774 rbsB, b3751 D-ribose ABC transporter periplasmic binding protein;... 0.03 OrthoFinder
AAL22742 STM3884, rbsB D-ribose transport protein [Ensembl]. Periplasmic... 0.05 OrthoFinder
AGT26397 N559_4807 D-ribose periplasmic binding protein [Ensembl].... 0.05 OrthoFinder
AGT26696 N559_5122, RbsB D-ribose transporter subunit RbsB [Ensembl]. Periplasmic... 0.04 OrthoFinder
CCL17793 BN171_1800016 ABC-type transport system, sugar-family extracellular... 0.03 OrthoFinder
CCL18506 rbsB, BN171_240011 ABC-type transport system, ribose-specific extracellular... 0.03 OrthoFinder
CRN86559 rbsB D-ribose-binding periplasmic protein precursor... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
MF GO:0008887 glycerate kinase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031388 organic acid phosphorylation IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR025997 SBP_2_dom 43 291
No external refs found!