Aliases : N559_2646, LysR
Description : transcriptional regulator LysR [Ensembl]. LysR substrate binding domain, lysR family [InterProScan].
Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AGT24322 | |
Cluster | HCCA: Cluster_51 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC75590 | hcaR, b2537 | hca operon transcriptional regulator [Ensembl]. LysR... | 0.05 | OrthoFinder | |
AAL22693 | STM3834 | putative LysR family transcriptional regulator... | 0.03 | OrthoFinder | |
AEA93063 | OG1RF_10376 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT24668 | N559_3005, CysB | transcriptional regulator CysB [Ensembl]. LysR substrate... | 0.04 | OrthoFinder | |
AGT26618 | N559_5041 | putative LysR-family transcriptional regulator... | 0.04 | OrthoFinder | |
CPC63513 | cidR, ERS093114_00910 | LysR family regulatory protein CidR [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRN70888 | gltC_1 | HTH-type transcriptional regulator GltC [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRN91471 | yofA_1 | HTH-type transcriptional regulator YofA [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRP00540 | cysL_3 | CysJI operon transcriptional activator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRP03013 | gltC_5 | HTH-type transcriptional regulator GltC [Ensembl]. LysR... | 0.05 | OrthoFinder | |
CRP05348 | cmpR_4 | HTH-type transcriptional activator CmpR [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRP53545 | cynR_8 | Cyn operon transcriptional activator [Ensembl]. LysR... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0017004 | cytochrome complex assembly | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
No external refs found! |