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  5. AGT24577

AGT24577 (N559_2912)


Aliases : N559_2912

Description : hypothetical protein [Ensembl]. Type VI secretion system, TssF, Type VI secretion system TssF [InterProScan].


Gene families : OG_02_0002017 (OrthoFinder) Phylogenetic Tree(s): OG0002017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT24577
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAL19224 STM0268 putative cytoplasmic protein [Ensembl]. Type VI... 0.03 OrthoFinder
CRO45655 No alias type VI secretion protein, family [Ensembl]. Type VI... 0.03 OrthoFinder
CRO78721 No alias type VI secretion protein, family [Ensembl]. Type VI... 0.03 OrthoFinder
KNA60680 VCV51_032119 type VI secretion protein [Ensembl]. Type VI secretion... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR010272 T6SS_TssF 1 580
No external refs found!