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  5. AGT25034

AGT25034 (N559_3381)


Aliases : N559_3381

Description : diguanylate cyclase domain protein [Ensembl]. GGDEF domain [InterProScan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25034
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AAC74110 dgcT, b1025 diguanylate cyclase, membrane-anchored [Ensembl].... 0.04 OrthoFinder
AAC74423 dgcM, b1341 diguanylate cyclase, csgD regulator [Ensembl]. PAS fold,... 0.04 OrthoFinder
AAC74563 dosC, b1490 diguanylate cyclase, cold-and stationary phase-induced... 0.04 OrthoFinder
CCL17159 BN171_1330020 Two-component sensor histidine kinase [Ensembl].... 0.03 OrthoFinder
CCL17605 BN171_1610001 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL19223 BN171_2970002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL19382 BN171_3090001 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL20093 BN171_3690037 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.03 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.03 OrthoFinder
CRP25666 pleD_4 Stalked cell differentiation-controlling protein... 0.02 OrthoFinder
KNA56144 VCV51_032984 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA59940 VCV51_032352 CHASE domain-containing protein [Ensembl]. CHASE domain,... 0.03 OrthoFinder
KNA59943 VCV51_032355 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA60713 VCV51_032152 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA60732 VCV51_032172 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 221 376
IPR033444 MASE5 30 219
No external refs found!