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AGT25039 (N559_3386, ArtM)


Aliases : N559_3386, ArtM

Description : arginine transporter permease subunit ArtM [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0001615 (OrthoFinder) Phylogenetic Tree(s): OG0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25039
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AAC73948 artM, b0861 arginine ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAL19823 STM0888, artM arginine 3rd transport system [Ensembl].... 0.07 OrthoFinder
CRN71190 occM_1 Octopine transport system permease protein OccM... 0.05 OrthoFinder
CRP49350 occM_2 Octopine transport system permease protein OccM... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 47 214
No external refs found!