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  5. AGT25117

AGT25117 (N559_3466)


Aliases : N559_3466

Description : putative ABC transport system permease component [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25117
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.03 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAL00508 spr1705, amiD ABC transporter membrane-spanning permease-oligopeptide... 0.02 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.03 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.05 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.04 OrthoFinder
AGT23465 N559_1723 ABC transporter permease [Ensembl]. N-terminal TM domain... 0.04 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CCL17023 oppC, BN171_1090004 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CPD17831 opp-1C, ERS093114_02218 Oligopeptide transporter putative membrane permease... 0.03 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.03 OrthoFinder
EDJ90655 CGSHi22421_04078 dipeptide transport system permease protein [Ensembl].... 0.03 OrthoFinder
KNA58585 VCV51_031122 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
InterPro domains Description Start Stop
IPR025966 OppC_N 11 61
IPR000515 MetI-like 105 288
No external refs found!