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  5. AGT25156

AGT25156 (N559_3508)


Aliases : N559_3508

Description : putative short-chain dehydrogenase/reductase SDR [Ensembl].


Gene families : OG_02_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25156
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC75198 yohF, b2137 putative oxidoreductase [Ensembl]. Enoyl-(Acyl carrier... 0.03 OrthoFinder
AGT24286 N559_2610 3-oxoacyl-(acyl-carrier-protein) reductase [Ensembl]. 0.04 OrthoFinder
AKI50173 L2625_02337 3-oxoacyl-(acyl carrier protein) reductase [Ensembl]. 0.03 OrthoFinder
CCG26766 No alias 3-oxoacyl-[acyl-carrier protein] reductase [Ensembl].... 0.01 OrthoFinder
CCP44108 fabG2, Rv1350 Probable 3-oxoacyl-[acyl-carrier protein] reductase... 0.02 OrthoFinder
CCP46352 Rv3530c Possible oxidoreductase [Ensembl]. Enoyl-(Acyl carrier... 0.02 OrthoFinder
CRO24838 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [Ensembl].... 0.07 OrthoFinder
CRO37313 fabG_4 3-oxoacyl-[acyl-carrier-protein] reductase FabG... 0.05 OrthoFinder
CRO60437 fabG_7 3-oxoacyl-[acyl-carrier-protein] reductase FabG... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009712 catechol-containing compound metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0018576 catechol 1,2-dioxygenase activity IEP Enrichment
BP GO:0018958 phenol-containing compound metabolic process IEP Enrichment
MF GO:0019114 catechol dioxygenase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!