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  5. AGT25225

AGT25225 (N559_3577)


Aliases : N559_3577

Description : peptidoglycan-associated outer membrane lipoprotein [Ensembl]. OmpA-like domain, OmpA family [InterProScan].


Gene families : OG_02_0000067 (OrthoFinder) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25225
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAC73835 pal, b0741 peptidoglycan-associated outer membrane lipoprotein... 0.04 OrthoFinder
AAL19693 STM0749, pal tol protein required for outer membrane integrity... 0.08 OrthoFinder
AKP14627 yiaD, WX61_00548 putative lipoprotein YiaD precursor [Ensembl]. OmpA... 0.03 OrthoFinder
CRP77149 pal Peptidoglycan-associated lipoprotein precursor... 0.03 OrthoFinder
CRP79055 psaB Photosystem I P700 chlorophyll a apoprotein A2... 0.05 OrthoFinder
KNA58150 VCV51_032767 OmpA family protein [Ensembl]. OmpA family [Interproscan]. 0.03 OrthoFinder
KNA58941 VCV51_032632 peptidoglycan-associated lipoprotein [Ensembl]. OmpA... 0.05 OrthoFinder
KNA60984 VCV51_031959 OmpA family protein [Ensembl]. OmpA family [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010565 regulation of cellular ketone metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019216 regulation of lipid metabolic process IEP Enrichment
BP GO:0019217 regulation of fatty acid metabolic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0062012 regulation of small molecule metabolic process IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006665 OmpA-like 73 168
No external refs found!