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AGT25378 (N559_3740, BetT)


Aliases : N559_3740, BetT

Description : choline transport protein BetT [Ensembl]. betaine/carnitine/choline family transporter, BCCT transporter family [InterProScan].


Gene families : OG_02_0000417 (OrthoFinder) Phylogenetic Tree(s): OG0000417_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25378
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAC73417 betT, b0314 choline transporter of high affinity [Ensembl]. BCCT... 0.11 OrthoFinder
AGT24931 N559_3273 putative transporter [Ensembl].... 0.04 OrthoFinder
CPC65789 betT, ERS093114_00981 High-affinity choline uptake protein BetT [Ensembl].... 0.1 OrthoFinder
CRP18187 betT_3 High-affinity choline transport protein [Ensembl]. BCCT... 0.08 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0071705 nitrogen compound transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000060 BCCT_transptr 17 501
No external refs found!