AGT25381 (N559_3743)

Aliases : N559_3743

Description : choline dehydrogenase [Ensembl].

Gene families : OG_02_0001599 (OrthoFinder) Phylogenetic Tree(s): OG0001599_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT25381
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAC73414 betA, b0311 choline dehydrogenase, a flavoprotein [Ensembl]. GMC... 0.06 OrthoFinder
CPC65656 betA, ERS093114_00977 choline dehydrogenase [Ensembl]. GMC oxidoreductase... 0.09 OrthoFinder
CRO15678 alkJ_1 Alcohol dehydrogenase [acceptor] [Ensembl]. GMC... 0.03 OrthoFinder
CRP00258 betA_2 Choline dehydrogenase [Ensembl]. GMC oxidoreductase... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 1 254
IPR007867 GMC_OxRtase_C 347 481
No external refs found!