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  5. AGT25390

AGT25390 (N559_3754)


Aliases : N559_3754

Description : putative binding-protein-dependent transport systems inner membrane component [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25390
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAL20554 STM1636 putative ABC-type transport system probable membrane... 0.04 OrthoFinder
AGT25284 N559_3642 glutamate/aspartate ABC superfamily ATP binding cassette... 0.04 OrthoFinder
AGT25743 N559_4117 glutamate/aspartate transport system inner membrane... 0.04 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CRO59374 glnM_3 putative glutamine ABC transporter permease protein GlnM... 0.04 OrthoFinder
CRO59397 yhdY Inner membrane amino-acid ABC transporter permease... 0.04 OrthoFinder
CRP60552 yecS_3 Inner membrane amino-acid ABC transporter permease... 0.03 OrthoFinder
CRP60578 yecS_4 Inner membrane amino-acid ABC transporter permease... 0.04 OrthoFinder
KNA59872 VCV51_032283 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 27 209
No external refs found!