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AGT25399 (N559_3763)


Aliases : N559_3763

Description : putative acridine efflux pump [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].


Gene families : OG_02_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25399
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC73564 acrB, b0462 multidrug efflux system protein [Ensembl].... 0.04 OrthoFinder
AAC75137 mdtC, b2076 multidrug efflux system, subunit C [Ensembl].... 0.03 OrthoFinder
AAL21031 STM2127, yegN putative outer membrane receptor [Ensembl].... 0.04 OrthoFinder
AAL21375 STM2481, acrD RND family aminoglycoside/multidrug efflux pump... 0.06 OrthoFinder
AGT21930 N559_0104, EefB multidrug efflux permease EefB [Ensembl]. AcrB/AcrD/AcrF... 0.06 OrthoFinder
AHY39622 CJ8421_01835 RND efflux system, inner membrane transporter CmeB... 0.03 OrthoFinder
AHY40240 CJ8421_05130 RND pump protein [Ensembl]. AcrB/AcrD/AcrF family [Interproscan]. 0.02 OrthoFinder
AKP14428 mexB, WX61_00346 Multidrug resistance protein MexB [Ensembl].... 0.04 OrthoFinder
CRN65212 acrB_1 Acriflavine resistance protein B [Ensembl].... 0.03 OrthoFinder
CRO09457 bepE_1 Efflux pump membrane transporter BepE [Ensembl].... 0.06 OrthoFinder
CRO88282 mexB Multidrug-efflux transporter MexB [Ensembl].... 0.05 OrthoFinder
EDJ91679 CGSHi22421_07988 predicted cation/multidrug efflux pump [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 1 1020
No external refs found!