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  5. AGT25400

AGT25400 (N559_3764, HlyD)


Aliases : N559_3764, HlyD

Description : putative secretion protein HlyD [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion, biotin-lipoyl like domain [InterProScan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25400
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC73565 acrA, b0463 multidrug efflux system [Ensembl]. HlyD membrane-fusion... 0.03 OrthoFinder
AAC76538 mdtE, b3513 anaerobic multidrug efflux transporter, ArcA-regulated... 0.03 OrthoFinder
AAL22259 STM3390, acrE transmembrane protein affecting septum formation and... 0.03 OrthoFinder
AGT21931 N559_0105 EefA [Ensembl]. Barrel-sandwich domain of CusB or HlyD... 0.04 OrthoFinder
AHY39623 CJ8421_01840 RND efflux system, membrane fusion protein CmeA... 0.04 OrthoFinder
AHY40239 CJ8421_05125 Membrane fusion protein of RND family multidrug efflux... 0.03 OrthoFinder
AKP14429 mexA, WX61_00347 Multidrug resistance protein MexA precursor [Ensembl].... 0.04 OrthoFinder
CCL18816 BN171_2660005 Putative lipoprotein [Ensembl]. Barrel-sandwich domain... 0.03 OrthoFinder
CRN65192 acrA Acriflavine resistance protein A precursor [Ensembl].... 0.04 OrthoFinder
CRO09488 bepF_1 Efflux pump periplasmic linker BepF [Ensembl].... 0.05 OrthoFinder
CRO58950 bepF_2 Efflux pump periplasmic linker BepF [Ensembl].... 0.03 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.07 OrthoFinder
CRP32469 mdtA_3 Multidrug transporter MdtA [Ensembl]. Biotin-lipoyl... 0.03 OrthoFinder
CRP65706 bepF_3 Efflux pump periplasmic linker BepF [Ensembl].... 0.03 OrthoFinder
EDJ91678 CGSHi22421_07983 predicted membrane-fusion protein [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR032317 HlyD_D23 107 273
IPR039562 MFP_biotin_lipoyl_2 55 102
No external refs found!