AGT25484 (N559_3848)


Aliases : N559_3848

Description : lysine decarboxylase 1 [Ensembl]. major domain, C-terminal domain, N-terminal domain [InterProScan].


Gene families : OG_02_0000204 (OrthoFinder) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25484
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AAC77078 adiA, b4117 arginine decarboxylase [Ensembl]. Orn/Lys/Arg... 0.03 OrthoFinder
AAC77092 cadA, b4131 lysine decarboxylase, acid-inducible [Ensembl].... 0.07 OrthoFinder
AAL21453 STM2559, cadA lysine decarboxylase 1 [Ensembl]. Orn/Lys/Arg... 0.04 OrthoFinder
AAL23120 STM4296, adi arginine decarboxylase [Ensembl]. Orn/Lys/Arg... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0016831 carboxy-lyase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity IEP Enrichment
MF GO:0008998 ribonucleoside-triphosphate reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016867 intramolecular transferase activity, transferring acyl groups IEP Enrichment
MF GO:0016993 precorrin-8X methylmutase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000310 Orn/Lys/Arg_deCO2ase_major_dom 130 545
IPR008286 Prn/Lys/Arg_de-COase_C 570 700
IPR005308 OKR_de-COase_N 14 124
No external refs found!