AGT25490 (N559_3854)


Aliases : N559_3854

Description : putative fimbrial biogenesis outer membrane usher protein [Ensembl]. Fimbrial-type adhesion domain [InterProScan].


Gene families : OG_02_0001412 (OrthoFinder) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25490
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC77274 fimF, b4318 minor component of type 1 fimbriae [Ensembl]. Fimbrial... 0.04 OrthoFinder
AGT22731 N559_0944, FimF protein FimF [Ensembl]. Fimbrial-type adhesion domain... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEA Interproscan
CC GO:0009289 pilus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR000259 Adhesion_dom_fimbrial 197 341
No external refs found!