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Aliases : N559_3854
Description : putative fimbrial biogenesis outer membrane usher protein [Ensembl]. Fimbrial-type adhesion domain [InterProScan].
Gene families : OG_02_0001412 (OrthoFinder) Phylogenetic Tree(s): OG0001412_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AGT25490 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC77274 | fimF, b4318 | minor component of type 1 fimbriae [Ensembl]. Fimbrial... | 0.04 | OrthoFinder | |
| AGT22731 | N559_0944, FimF | protein FimF [Ensembl]. Fimbrial-type adhesion domain... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007155 | cell adhesion | IEA | Interproscan |
| CC | GO:0009289 | pilus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | Enrichment |
| MF | GO:0005402 | carbohydrate:cation symporter activity | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0008484 | sulfuric ester hydrolase activity | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008733 | L-arabinose isomerase activity | IEP | Enrichment |
| BP | GO:0009297 | pilus assembly | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015288 | porin activity | IEP | Enrichment |
| MF | GO:0015295 | solute:proton symporter activity | IEP | Enrichment |
| MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022829 | wide pore channel activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0030030 | cell projection organization | IEP | Enrichment |
| BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
| BP | GO:0043711 | pilus organization | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000259 | Adhesion_dom_fimbrial | 197 | 341 |
| No external refs found! |