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  5. AGT25492

AGT25492 (N559_3856)


Aliases : N559_3856

Description : pilin chaperone [Ensembl]. PapD N-terminal domain, C-terminal domain [InterProScan].


Gene families : OG_02_0000278 (OrthoFinder) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25492
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC75171 yehC, b2110 putative periplasmic pilin chaperone [Ensembl]. Pili... 0.03 OrthoFinder
AAL19290 STM0336, stbE putative fimbriae; chaparone [Ensembl]. Pili assembly... 0.05 OrthoFinder
AAL19293 STM0339, stbB putative fimbriae; chaparone [Ensembl]. Pili assembly... 0.05 OrthoFinder
AGT23010 N559_1246 putative chaperone [Ensembl]. PapD N-terminal domain,... 0.04 OrthoFinder
AGT23015 N559_1251 pilin chaperone [Ensembl]. C-terminal domain, PapD... 0.03 OrthoFinder
CRO24349 ecpD_4 Chaperone protein EcpD precursor [Ensembl]. Pili... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
BP GO:0071555 cell wall organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR016147 Pili_assmbl_chaperone_N 18 139
IPR016148 Pili_assmbl_chaperone_C 163 222
No external refs found!