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  5. AGT25493

AGT25493 (N559_3857)


Aliases : N559_3857

Description : fimbrial protein [Ensembl].


Gene families : OG_02_0000602 (OrthoFinder) Phylogenetic Tree(s): OG0000602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25493
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73813 ybgD, b0719 putative fimbrial-like adhesin protein [Ensembl].... 0.03 OrthoFinder
AAC77270 fimA, b4314 major type 1 subunit fimbrin (pilin) [Ensembl]. Fimbrial... 0.09 OrthoFinder
AAL19498 STM0544, fimI fimbrial protein internal segment [Ensembl]. 0.03 OrthoFinder
AGT22735 N559_0948 major type 1 subunit fimbrin (pilin) [Ensembl].... 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR039458 FimA-like 51 186
No external refs found!