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  5. AGT25592

AGT25592 (N559_3957)


Aliases : N559_3957

Description : acridine efflux pump [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [InterProScan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25592
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AKP14429 mexA, WX61_00347 Multidrug resistance protein MexA precursor [Ensembl].... 0.03 OrthoFinder
CBI66362 HPB8_805 conserved hypothetical protein [Ensembl]. Biotin-lipoyl... 0.03 OrthoFinder
CCL18816 BN171_2660005 Putative lipoprotein [Ensembl]. Barrel-sandwich domain... 0.05 OrthoFinder
CRO58950 bepF_2 Efflux pump periplasmic linker BepF [Ensembl].... 0.03 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.05 OrthoFinder
CRP58366 mdtA_4 Multidrug transporter MdtA [Ensembl]. Barrel-sandwich... 0.04 OrthoFinder
KNA55219 VCV51_033051 efflux transporter [Ensembl]. Barrel-sandwich domain of... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015562 efflux transmembrane transporter activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006143 RND_pump_MFP 43 360
IPR032317 HlyD_D23 63 293
No external refs found!