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  5. AGT25620

AGT25620 (N559_3989)


Aliases : N559_3989

Description : glycoprotein/polysaccharide metabolism [Ensembl].


Gene families : OG_02_0002253 (OrthoFinder) Phylogenetic Tree(s): OG0002253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25620
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC73556 ybaY, b0453 outer membrane lipoprotein [Ensembl]. Type III secretion... 0.2 OrthoFinder
AAL19420 STM0465, ybaY glycoprotein/polysaccharide metabolism [Ensembl]. Type... 0.2 OrthoFinder
KNA54653 VCV51_030743 hypothetical protein [Ensembl]. Type III secretion... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR039366 Pilotin 47 151
No external refs found!