AGT25854 (N559_4232)

Aliases : N559_4232

Description : 30S ribosomal protein S2 [Ensembl].

Gene families : OG_02_0000332 (OrthoFinder) Phylogenetic Tree(s): OG0000332_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT25854
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AAC73280	rpsB, b0169	30S ribosomal subunit protein S2 [Ensembl]. Ribosomal...	0.07	OrthoFinder
AAL00822	spr2020, rpsB	30S Ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.04	OrthoFinder
AAL19180	STM0216, rpsB	30S ribosomal subunit protein S2 [Ensembl]. Ribosomal...	0.1	OrthoFinder
ADK87275	rpsB, MPNE_0240	ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.03	OrthoFinder
AEA94520	rpsB, OG1RF_11833	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.05	OrthoFinder
AHY40386	rpsB, CJ8421_05895	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.06	OrthoFinder
AKP14987	rpsB, WX61_00924	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.04	OrthoFinder
CBI67239	rpsB, HPB8_1682	small subunit ribosomal protein S2 [Ensembl]. Ribosomal...	0.04	OrthoFinder
CCG26655	No alias	SSU ribosomal protein S2p (SAe) [Ensembl]. Ribosomal...	0.07	OrthoFinder
CCL18526	rpsB, BN171_2410008	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.04	OrthoFinder
CCP45692	rpsB, Rv2890c	30S ribosomal protein S2 RpsB [Ensembl]. Ribosomal...	0.05	OrthoFinder
CRO13952	rpsB	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.09	OrthoFinder
EDJ91697	secA, CGSHi22421_08078	preprotein translocase subunit SecA [Ensembl]. Ribosomal...	0.04	OrthoFinder
EDJ91698	CGSHi22421_08083	30S ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.07	OrthoFinder
KNA52712	VCV51_031518	ribosomal protein S2 [Ensembl]. Ribosomal protein S2...	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006771	riboflavin metabolic process	IEP	Enrichment
BP	GO:0009231	riboflavin biosynthetic process	IEP	Enrichment
CC	GO:0009349	riboflavin synthase complex	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Enrichment
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
CC	GO:1990234	transferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001865	Ribosomal_S2	4	219

External Links

No external refs found!

AGT25854 (N559_4232)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation