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  5. AGT25928

AGT25928 (N559_4313)


Aliases : N559_4313

Description : putative permease of the Na+:galactoside symporter family [Ensembl].


Gene families : OG_02_0000980 (OrthoFinder) Phylogenetic Tree(s): OG0000980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25928
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73373 yagG, b0270 CP4-6 prophage; putative sugar transporter [Ensembl].... 0.05 OrthoFinder
AAC76681 yicJ, b3657 putative transporter [Ensembl]. MFS/sugar transport... 0.1 OrthoFinder
AAL19006 STM0042 putative sodium galactoside symporter [Ensembl].... 0.05 OrthoFinder
AAL19113 STM0149 putative permease of the Na+:galactoside symporter... 0.07 OrthoFinder
AAL22609 STM3750, yicJ putative GPH family transport protein [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!