AGT26243 (N559_4649)

Aliases : N559_4649

Description : hypothetical protein [Ensembl]. Helix-turn-helix domain, rpiR family [InterProScan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26243
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AAC77050	alsR, b4089	d-allose-inducible als operon transcriptional repressor;...	0.02	OrthoFinder
AAL20803	STM1887, yebK	putative transcriptional regulator [Ensembl]. SIS...	0.06	OrthoFinder
AEA92712	OG1RF_10025	phosphosugar-binding transcriptional regulator...	0.04	OrthoFinder
AEA95093	OG1RF_12406	RpiR family phosphosugar-binding transcriptional...	0.03	OrthoFinder
AKI48471	L2625_00533	SIS domain protein [Ensembl]. Sugar isomerase (SIS),...	0.03	OrthoFinder
AKI50704	L2625_02920	phosphosugar-binding transcriptional regulator, RpiR...	0.03	OrthoFinder
CCL18633	BN171_2480008	Transcriptional regulator, RpiR family [Ensembl]....	0.03	OrthoFinder
CCL19479	BN171_3180003	Transcriptional regulator, RpiR family [Ensembl]....	0.03	OrthoFinder
CCL20136	BN171_370010	Transcriptional regulator, RpiR family [Ensembl]....	0.05	OrthoFinder
CPD10616	ybbH_2, ERS093114_02049	RpiR family transcriptional regulator [Ensembl]. SIS...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
BP	GO:0006739	NADP metabolic process	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
MF	GO:0008811	chloramphenicol O-acetyltransferase activity	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016657	oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0033739	preQ1 synthase activity	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000281	HTH_RpiR	1	73

External Links

No external refs found!