AGT26243 (N559_4649)


Aliases : N559_4649

Description : hypothetical protein [Ensembl]. Helix-turn-helix domain, rpiR family [InterProScan].


Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26243
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC77050 alsR, b4089 d-allose-inducible als operon transcriptional repressor;... 0.02 OrthoFinder
AAL20803 STM1887, yebK putative transcriptional regulator [Ensembl]. SIS... 0.06 OrthoFinder
AEA92712 OG1RF_10025 phosphosugar-binding transcriptional regulator... 0.04 OrthoFinder
AEA95093 OG1RF_12406 RpiR family phosphosugar-binding transcriptional... 0.03 OrthoFinder
AKI48471 L2625_00533 SIS domain protein [Ensembl]. Sugar isomerase (SIS),... 0.03 OrthoFinder
AKI50704 L2625_02920 phosphosugar-binding transcriptional regulator, RpiR... 0.03 OrthoFinder
CCL18633 BN171_2480008 Transcriptional regulator, RpiR family [Ensembl].... 0.03 OrthoFinder
CCL19479 BN171_3180003 Transcriptional regulator, RpiR family [Ensembl].... 0.03 OrthoFinder
CCL20136 BN171_370010 Transcriptional regulator, RpiR family [Ensembl].... 0.05 OrthoFinder
CPD10616 ybbH_2, ERS093114_02049 RpiR family transcriptional regulator [Ensembl]. SIS... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008811 chloramphenicol O-acetyltransferase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0033739 preQ1 synthase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000281 HTH_RpiR 1 73
No external refs found!