AGT26413 (N559_4827)


Aliases : N559_4827

Description : putative inner membrane protein [Ensembl]. LrgB-like family, CidB/LrgB family [InterProScan].


Gene families : OG_02_0000575 (OrthoFinder) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26413
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC75203 yohK, b2142 LrgB family inner membrane protein [Ensembl]. LrgB-like... 0.07 OrthoFinder
AAL21086 STM2182, yohK putative transmembrane protein [Ensembl]. LrgB-like... 0.03 OrthoFinder
AEA95147 lrgB, OG1RF_12460 murein hydrolase regulator LrgB [Ensembl]. LrgB-like... 0.02 OrthoFinder
CRP02951 yohK_1 Inner membrane protein YohK [Ensembl]. LrgB-like family... 0.03 OrthoFinder
EDJ91158 CGSHi22421_10467 deoxyguanosinetriphosphate triphosphohydrolase-like... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR007300 CidB/LrgB 14 224
No external refs found!