AGT26563 (N559_4981)


Aliases : N559_4981

Description : diaminopimelate epimerase [Ensembl].


Gene families : OG_02_0000862 (OrthoFinder) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26563
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC76812 dapF, b3809 diaminopimelate epimerase [Ensembl]. Diaminopimelate... 0.04 OrthoFinder
AAL22791 STM3947, dapF diaminopimelate epimerase [Ensembl]. Diaminopimelate... 0.05 OrthoFinder
AKI50013 dapF, L2625_02166 diaminopimelate epimerase [Ensembl]. Diaminopimelate... 0.03 OrthoFinder
CCL19052 dapF, BN171_2830020 Diaminopimelate epimerase (DAP epimerase) [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008837 diaminopimelate epimerase activity IEA Interproscan
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001653 DAP_epimerase_DapF 153 267
IPR001653 DAP_epimerase_DapF 4 124
No external refs found!