AGT26630 (N559_5053, HslU)

Aliases : N559_5053, HslU

Description : ATP-dependent protease ATP-binding subunit HslU [Ensembl]. AAA domain (Cdc48 subfamily), D2-small domain, ATPase family associated with various cellular activities (AAA) [InterProScan].

Gene families : OG_02_0000918 (OrthoFinder) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26630
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AAC76913	hslU, b3931	molecular chaperone and ATPase component of HslUV...	0.21	OrthoFinder
AAL22931	STM4091, hslU	ATPase component of the HslUV protease [Ensembl]....	0.23	OrthoFinder
AEA94045	hslU, OG1RF_11358	ATP-dependent hsl protease ATP-binding subunit HslU...	0.03	OrthoFinder
CRO57730	hslU	Unfoldase HslU [Ensembl]. AAA domain (Cdc48 subfamily),...	0.18	OrthoFinder
EDJ91496	hslU, CGSHi22421_06992	ATP-dependent protease ATP-binding subunit [Ensembl]....	0.18	OrthoFinder
KNA54903	VCV51_031793	heat shock protein HslVU [Ensembl]. C-terminal, AAA...	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Enrichment
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
MF	GO:0042802	identical protein binding	IEP	Enrichment
MF	GO:0042803	protein homodimerization activity	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment
MF	GO:0051087	chaperone binding	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
MF	GO:0060590	ATPase regulator activity	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	188	330
IPR019489	Clp_ATPase_C	336	406
IPR003959	ATPase_AAA_core	53	136

External Links

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AGT26630 (N559_5053, HslU)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation